Transcript: lnc-LRRC52-9:1

Basic information

LNCipedia transcript ID: lnc-LRRC52-9:1 
LNCipedia gene ID: lnc-LRRC52-9
Location (hg38): chr1:164626036-164682483
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1864 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT007283
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.1865 non-coding 
CPAT coding probability 13.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC52-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PBX1-3:3
4.0 lnc-PBX1-3:3
4.1 lnc-PBX1-3:3
5.0 lnc-PBX1-3:3
5.1 lnc-MAEL-53:3
5.2 lnc-LRRC52-9:1