Transcript: lnc-LRRC58-1:5

Basic information

LNCipedia transcript ID: lnc-LRRC58-1:5 
LNCipedia gene ID: lnc-LRRC58-1
Ensembl Gene ID: ENSG00000282950
Ensembl Transcript ID: ENST00000634744
Location (hg38): chr3:120365993-120368326
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 825 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634744.1
Alternative gene names: ENSG00000282950.1; RP11-174O3.6; AC063952.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -223.0928 non-coding 
CPAT coding probability 32.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC58-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LRRC58-1:5
4.1 lnc-LRRC58-1:5
5.0 lnc-LRRC58-1:5
5.1 lnc-GOLGB1-15:1
5.2 lnc-LRRC58-1:5