Transcript: lnc-LRRC7-21:1

Basic information

LNCipedia transcript ID: lnc-LRRC7-21:1 
LNCipedia gene ID: lnc-LRRC7-21
Ensembl Gene ID: ENSG00000285041
Ensembl Transcript ID: ENST00000646352
Location (hg38): chr1:68633701-68640425
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2636 bp
Exons: 3
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646352.1
Alternative gene names: ENSG00000285041.1; AL035412.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -166.3251 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC7-21:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CTH-21:1
5.1 lnc-CTH-21:1
5.2 lnc-LRRC7-21:1