Transcript: lnc-LRRC71-4:4

Basic information

LNCipedia transcript ID: lnc-LRRC71-4:4 
LNCipedia gene ID: lnc-LRRC71-4
Location (hg38): chr1:157275103-157283885
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2118 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271736.1|FTMT20300000855.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.3658 non-coding 
CPAT coding probability 6.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC71-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LRRC71-4:4
5.0 lnc-LRRC71-4:4
5.1 lnc-PMF1-BGLAP-23:4
5.2 lnc-LRRC71-4:4