Transcript: lnc-LRRC75A-2:1

Basic information

LNCipedia transcript ID: lnc-LRRC75A-2:1 
LNCipedia gene ID: lnc-LRRC75A-2
Location (hg38): chr17:16425042-16428868
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3827 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000577965.1; RP11-138I1.1-001; OTTHUMT00000444962.1; NONHSAT145911
Alternative gene names: ENSG00000264087.1; RP11-138I1.1; OTTHUMG00000179143.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 270.6573 coding 
CPAT coding probability 38.14% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LRRC75A-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM211A-2:1
4.0 lnc-FAM211A-2:1
4.1 lnc-FAM211A-2:1
5.0 lnc-FAM211A-2:1
5.1 lnc-COPS3-42:1
5.2 lnc-LRRC75A-2:1