Transcript: lnc-LRRIQ1-2:3

Basic information

LNCipedia transcript ID: lnc-LRRIQ1-2:3 
LNCipedia gene ID: lnc-LRRIQ1-2
Ensembl Gene ID: ENSG00000257729
Ensembl Transcript ID: ENST00000642846
Location (hg38): chr12:84154434-84294556
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 733 bp
Exons: 8
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000642846.1
Alternative gene names: ENSG00000257729.2; AC090679.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -93.7602 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRIQ1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-LRRIQ1-2:3
5.1 lnc-LRRIQ1-2:3
5.2 lnc-LRRIQ1-2:3