Transcript: lnc-LRRK1-3:8

Basic information

LNCipedia transcript ID: lnc-LRRK1-3:8 
LNCipedia gene ID: lnc-LRRK1-3
Location (hg38): chr15:101295401-101296612
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1212 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259172.1|HBMT00000494892.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.313 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRK1-3:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LRRK1-3:8
5.0 lnc-LRRK1-3:8
5.1 lnc-OR4F15-10:5
5.2 lnc-LRRK1-3:8