Transcript: lnc-LTBP3-2:3

Basic information

LNCipedia transcript ID: lnc-LTBP3-2:3 
LNCipedia gene ID: lnc-LTBP3-2
Location (hg38): chr11:65499067-65511020
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3579 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019669; NONHSAT022146
Alternative gene names: XLOC_009474; linc-SLC25A45-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.9243 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LTBP3-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LTBP3-1:3
3.1 lnc-LTBP3-2:3
4.0 lnc-LTBP3-2:3
4.1 lnc-LTBP3-2:3
5.0 lnc-LTBP3-2:3
5.1 lnc-LTBP3-15:3
5.2 lnc-LTBP3-2:3