Transcript: lnc-LTBP3-2:9

Basic information

LNCipedia transcript ID: lnc-LTBP3-2:9 
LNCipedia gene ID: lnc-LTBP3-2
Location (hg38): chr11:65413742-65423153
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1449 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000005844.1|MICT00000061233.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -63.9221 non-coding 
CPAT coding probability 6.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LTBP3-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LTBP3-2:9
5.0 lnc-LTBP3-2:9
5.1 lnc-LTBP3-15:8
5.2 lnc-LTBP3-2:9