Transcript: lnc-LXN-1:5

Basic information

LNCipedia transcript ID: lnc-LXN-1:5 
LNCipedia gene ID: lnc-LXN-1
Location (hg38): chr3:158544907-158571066
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1222 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243150.1|MICT00000253312.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 12.1685 non-coding 
CPAT coding probability 1.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LXN-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LXN-1:5
5.0 lnc-LXN-1:5
5.1 lnc-SHOX2-9:4
5.2 lnc-LXN-1:5