Transcript: lnc-LXN-1:6

Basic information

LNCipedia transcript ID: lnc-LXN-1:6 
LNCipedia gene ID: lnc-LXN-1
Location (hg38): chr3:158543084-158571066
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3218 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243150.1|HBMT00001014396.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 223.3755 coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LXN-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LXN-1:6
5.0 lnc-LXN-1:6
5.1 lnc-SHOX2-9:3
5.2 lnc-LXN-1:6