Transcript: lnc-LXN-1:9

Basic information

LNCipedia transcript ID: lnc-LXN-1:9 
LNCipedia gene ID: lnc-LXN-1
Location (hg38): chr3:158553858-158571066
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 631 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243150.1|ENST00000479233.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
RMHCLPLR 92.3076923076923% antisense-3
Lee translation initiation sites non-coding 
PhyloCSF score -134.1971 non-coding 
CPAT coding probability 1.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LXN-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LXN-1:9
5.0 lnc-LXN-1:9
5.1 lnc-SHOX2-9:7
5.2 lnc-LXN-1:9