Transcript: lnc-LYL1-3:2

Basic information

LNCipedia transcript ID: lnc-LYL1-3:2 
LNCipedia gene ID: lnc-LYL1-3
Ensembl Gene ID: ENSG00000267610
Ensembl Transcript ID: ENST00000588095
Location (hg38): chr19:13069792-13071374
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1583 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT061323; ENST00000588095.2
Alternative gene names: ENSG00000267610.2; AC007787.2; AC007787.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.9297 non-coding 
CPAT coding probability 16.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYL1-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYL1-3:2
4.0 lnc-LYL1-3:2
4.1 lnc-LYL1-3:2
5.0 lnc-LYL1-3:2
5.1 lnc-ZNF443-25:1
5.2 lnc-LYL1-3:2