Transcript: lnc-LYPLAL1-1:4

Basic information

LNCipedia transcript ID: lnc-LYPLAL1-1:4 
LNCipedia gene ID: lnc-LYPLAL1-1
Location (hg38): chr1:219294159-219326931
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1119 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001280; NONHSAT009551
Alternative gene names: XLOC_000566; linc-IARS2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -249.3282 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYPLAL1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LYPLAL1-1:4
3.1 lnc-LYPLAL1-1:4
4.0 lnc-LYPLAL1-1:4
4.1 lnc-LYPLAL1-1:4
5.0 lnc-LYPLAL1-1:4
5.1 lnc-CAPN2-70:5
5.2 lnc-LYPLAL1-1:4