Transcript: lnc-LYPLAL1-7:2

Basic information

LNCipedia transcript ID: lnc-LYPLAL1-7:2 
LNCipedia gene ID: lnc-LYPLAL1-7
Ensembl Gene ID: ENSG00000277007
Ensembl Transcript ID: ENST00000612055
Location (hg38): chr1:219270774-219273387
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2614 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612055.1
Alternative gene names: ENSG00000277007.1; RP11-392O17.2; AC096642.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -3.0259 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYPLAL1-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LYPLAL1-7:2
4.1 lnc-LYPLAL1-7:2
5.0 lnc-LYPLAL1-7:2
5.1 lnc-CAPN2-69:2
5.2 lnc-LYPLAL1-7:2