Transcript: lnc-LYZL1-15:28

Basic information

LNCipedia transcript ID: lnc-LYZL1-15:28 
LNCipedia gene ID: lnc-LYZL1-15
Location (hg38): chr10:29423673-29427651
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3979 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA162:1
Alternative gene names: ; RP11-534G20.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.9008 non-coding 
CPAT coding probability 7.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYZL1-15:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 SVIL-AS1:30
4.1 SVIL-AS1:30
5.0 SVIL-AS1:30
5.1 lnc-NPY4R2-566:28
5.2 lnc-LYZL1-15:28