Transcript: lnc-LYZL1-15:5

Basic information

LNCipedia transcript ID: lnc-LYZL1-15:5 
LNCipedia gene ID: lnc-LYZL1-15
Location (hg38): chr10:29409544-29423226
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2932 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA161:1
Alternative gene names: ; RP11-534G20.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.2659 non-coding 
CPAT coding probability 46.50% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LYZL1-15:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 SVIL-AS1:14
4.1 SVIL-AS1:14
5.0 SVIL-AS1:14
5.1 lnc-NPY4R2-566:5
5.2 lnc-LYZL1-15:5