Transcript: lnc-M1AP-6:5

Basic information

LNCipedia transcript ID: lnc-M1AP-6:5 
LNCipedia gene ID: lnc-M1AP-6
Location (hg38): chr2:74832685-74833910
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1226 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA788:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.7801 non-coding 
CPAT coding probability 4.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-M1AP-6:5 no no no no

Available literature

  1. Yang (2015), Genome-wide analysis of long noncoding RNA profile in human gastric epithelial cell response to Helicobacter pylori., Jpn. J. Infect. Dis.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C2orf65-6:3
4.1 lnc-C2orf65-6:3
5.0 lnc-C2orf65-6:3
5.1 lnc-GKN2-172:5
5.2 lnc-M1AP-6:5