Transcript: lnc-MACC1-3:2

Basic information

LNCipedia transcript ID: lnc-MACC1-3:2 
LNCipedia gene ID: lnc-MACC1-3
RefSeq ID: NR_110120
Location (hg38): chr7:20328301-20331762
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 816 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110120; NR_110120.1
Alternative gene names: LOC101927811


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -297.2382 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MACC1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MACC1-3:2
4.0 lnc-MACC1-3:2
4.1 lnc-MACC1-3:2
5.0 lnc-MACC1-3:2
5.1 lnc-SNX13-20:6
5.2 lnc-MACC1-3:2