Transcript: lnc-MAFA-3:1

Basic information

LNCipedia transcript ID: lnc-MAFA-3:1 
LNCipedia gene ID: lnc-MAFA-3
Location (hg38): chr8:143437999-143440010
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2012 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: l_3712_NR_026785
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.932 non-coding 
CPAT coding probability 27.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAFA-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAFA-3:1
4.0 lnc-MAFA-3:1
4.1 lnc-MAFA-3:1
5.0 lnc-MAFA-3:1
5.1 lnc-LYNX1-18:1
5.2 lnc-MAFA-3:1