Transcript: lnc-MAGEA12-3:3

Basic information

LNCipedia transcript ID: lnc-MAGEA12-3:3 
LNCipedia gene ID: lnc-MAGEA12-3
Location (hg38): chrX:152740250-152740681
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 222 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT139046
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -351.6192 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAGEA12-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAGEA12-3:3
4.0 lnc-MAGEA12-3:3
4.1 lnc-MAGEA12-3:3
5.0 lnc-MAGEA12-3:3
5.1 lnc-MAGEA11-30:2
5.2 lnc-MAGEA12-3:3