Transcript: lnc-MAL2-1:1

Basic information

LNCipedia transcript ID: lnc-MAL2-1:1 
LNCipedia gene ID: lnc-MAL2-1
Location (hg38): chr8:119037511-119038215
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 254 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014840; NONHSAT128419
Alternative gene names: XLOC_006908; linc-COLEC10-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -372.9778 non-coding 
CPAT coding probability 2.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAL2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NOV-1:1
3.1 lnc-NOV-1:1
4.0 lnc-NOV-1:1
4.1 lnc-NOV-1:1
5.0 lnc-NOV-1:1
5.1 lnc-MAL2-2:1
5.2 lnc-MAL2-1:1