Transcript: lnc-MALT1-7:2

Basic information

LNCipedia transcript ID: lnc-MALT1-7:2 
LNCipedia gene ID: lnc-MALT1-7
Ensembl Gene ID: ENSG00000267579
Ensembl Transcript ID: ENST00000589794
Location (hg38): chr18:58557070-58566677
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 335 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000589794.1
Alternative gene names: ENSG00000267579.1; RP11-126O1.2; AC104971.3; AC104971.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.3499 non-coding 
CPAT coding probability 1.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MALT1-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MALT1-7:2
4.0 lnc-MALT1-7:2
4.1 lnc-MALT1-7:2
5.0 lnc-MALT1-7:2
5.1 lnc-WDR7-7:6
5.2 lnc-MALT1-7:2