Transcript: lnc-MAMSTR-2:1

Basic information

LNCipedia transcript ID: lnc-MAMSTR-2:1 
LNCipedia gene ID: lnc-MAMSTR-2
Location (hg38): chr19:48691134-48695571
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1047 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002oya_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.4144 non-coding 
CPAT coding probability 2.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAMSTR-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAMSTR-2:1
4.0 lnc-MAMSTR-2:1
4.1 lnc-MAMSTR-2:1
5.0 lnc-MAMSTR-2:1
5.1 lnc-TMEM143-16:1
5.2 lnc-MAMSTR-2:1