Transcript: lnc-MAN2A1-3:3

Basic information

LNCipedia transcript ID: lnc-MAN2A1-3:3 
LNCipedia gene ID: lnc-MAN2A1-3
Location (hg38): chr5:109896443-109897215
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 773 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr5_6274_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -64.9669 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAN2A1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC011366.3.1-3:1
4.0 lnc-AC011366.3.1-3:1
4.1 lnc-AC011366.3.1-3:1
5.0 lnc-AC011366.3.1-3:1
5.1 lnc-AP3S1-78:1
5.2 lnc-MAN2A1-3:3