Transcript: lnc-MANEA-3:1

Basic information

LNCipedia transcript ID: lnc-MANEA-3:1 
LNCipedia gene ID: lnc-MANEA-3
Location (hg38): chr6:93707083-93776481
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4708 bp
Exons: 9
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011180; NONHSAT114021
Alternative gene names: XLOC_005392; linc-MANEA-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.9281 non-coding 
CPAT coding probability 15.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MANEA-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MANEA-3:1
3.1 lnc-MANEA-3:1
4.0 lnc-MANEA-3:1
4.1 lnc-MANEA-3:1
5.0 lnc-MANEA-3:1
5.1 lnc-PM20D2-37:1
5.2 lnc-MANEA-3:1