Transcript: lnc-MANEA-3:5

Basic information

LNCipedia transcript ID: lnc-MANEA-3:5 
LNCipedia gene ID: lnc-MANEA-3
Location (hg38): chr6:93718303-93746758
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2949 bp
Exons: 7
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011182; NONHSAT114027
Alternative gene names: XLOC_005392; linc-MANEA-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.263 non-coding 
CPAT coding probability 2.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MANEA-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MANEA-3:5
3.1 lnc-MANEA-3:5
4.0 lnc-MANEA-3:5
4.1 lnc-MANEA-3:5
5.0 lnc-MANEA-3:5
5.1 lnc-PM20D2-37:6
5.2 lnc-MANEA-3:5