Transcript: lnc-MANSC4-9:1

Basic information

LNCipedia transcript ID: lnc-MANSC4-9:1 
LNCipedia gene ID: lnc-MANSC4-9
Location (hg38): chr12:27520618-27523992
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3375 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248100.2|ENCT00000100151.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -39.9367 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MANSC4-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MANSC4-9:1
5.0 lnc-MANSC4-9:1
5.1 lnc-WBP11-102:1
5.2 lnc-MANSC4-9:1