Transcript: lnc-MAP1LC3B-1:7

Basic information

LNCipedia transcript ID: lnc-MAP1LC3B-1:7 
LNCipedia gene ID: lnc-MAP1LC3B-1
Location (hg38): chr16:87317496-87318181
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 505 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270006.1|FTMT26300019441.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -124.077 non-coding 
CPAT coding probability 5.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP1LC3B-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAP1LC3B-1:7
5.0 lnc-MAP1LC3B-1:7
5.1 lnc-MAP1LC3B-1:7
5.2 lnc-MAP1LC3B-1:7