Transcript: lnc-MAP1LC3B-3:4

Basic information

LNCipedia transcript ID: lnc-MAP1LC3B-3:4 
LNCipedia gene ID: lnc-MAP1LC3B-3
Location (hg38): chr16:87212115-87226429
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1453 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_110939
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -44.8813 non-coding 
CPAT coding probability 2.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP1LC3B-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP1LC3B-3:4
4.0 lnc-MAP1LC3B-3:4
4.1 lnc-MAP1LC3B-3:4
5.0 lnc-MAP1LC3B-3:4
5.1 lnc-MAP1LC3B-14:1
5.2 lnc-MAP1LC3B-3:4