Transcript: lnc-MAP1LC3B2-28:5

Basic information

LNCipedia transcript ID: lnc-MAP1LC3B2-28:5 
HGNC Gene Symbol: lnc-MAP1LC3B2-28    
HGNC Full Gene Name: long intergenic non-protein coding RNA 173
Ensembl Gene ID: ENSG00000196668
Ensembl Transcript ID: ENST00000480237
RefSeq ID: NR_027345
Location (hg38): chr12:116533422-116535521
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1597 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000480237; TCONS_00020161; ENST00000480237.1; LINC00173-002; OTTHUMT00000349521.1; NONHSAT140097; NR_027345; NR_027345.1
Alternative gene names: ENSG00000196668; XLOC_009897; linc-MAP1LC3B2-2; RP11-809C9.1; ENSG00000196668.3; LINC00173; OTTHUMG00000157726.1; FLJ42957

RNA sequence:
AGCCTTCTGGGTCCGAGGCTCCCACCTGCTCTAAGCGCTTGACACCCTTTAAAAAAATGTATTTAAAGAGGCTGGTTCCTATCCATCCGACTGGAGGCATCTCAGTGCAAGAGCAAAGCTAAGTCCTGCACACGCTCCTCCCCTCCTCCTCCTCCTTCTCCCCCCAGGTTTTCCCGAATGTATCTACTCCGGTTACAACTAGACGCGGCCCCTCCCCCACCTGCCTCCCCCCTTCCTTCCCTCGATCGTGGAGGGAGCGTTCTCTGTGCCTTCCCAAGTCCCCGTGGGGGACCTTCTATGTTGGAGTGGGGGGAGGGGGGGAGGGTCATATAACGAAGGCCAGAAAGAACAAATTAGATAATCAAAAGAATTATAGTAATTGCTTTCACTTTCCCCCGCCCGCTCAGCGGATTCCCTCCCCCGCCCCTCCCCTGGTTTTTCTGTCTGTCGGGAATACTCGGTCTTTCCGACCCCCTCCCCTCCCCCAGGTTCCTCCTCTCCTCTCCCCTTGCTCGCGCGTTCCCTCTCTTCCTCCGTTTTCTGGTGTGCTGGAACGTTCAGCGGAATATGATGAATGATCACCTGTCACAGCTTGTTTATTATAATGCAGGCAATCAATTACACATCCCCAATGCTGGCCGGCCCGCAGGAAATTTATATGCTCAGCACAAACCAATGTGAAAATGGAATCTCATTTGCCAAATGTCTTTCTCCCCGTACAGCACGATGATTACAGTCTGTGTTTGTTTCAACAGTCGTGTACAACTGACAGTGCCATCATTTACTGCCTGGCTCAGGTCACGTTACTCTAAGGCTTTATTTATGGTGTTACGAAGGGCAGCACAGGAAAAGGACAAGGGTGTCTGTCAGGGATGGCACTGTGTTAAAAAGTGGGCGTGCAAGGGCCGCATTCCCGGGCAGCCGCTGCAACCTCAGCCCCTGGGCCCTTACCTCCGCAGCCTCTCCCAGCATCCAGCTACCCAGACTCCAAGGCCCCAGGCGAGAGCCAGCTCTCGGTACCTGGAGCTCCACAGGTCCCAGAATCGGGGTGGATCAGAGTTCAAATTCTGGTTCTGCTACTGTCTAATTGCGTGCTGCAGGGACTCAATCTCTTCATCTGGGAAATGGGAGTAATAACCCTTGGCAGGAATGTTGCGATCCTCTGGGATGTCAGAGGTGTTGATGAATGTTAGTTCCCGGGACTTCGGAAAGAGGTCCCGTTGGAAGAGATGTGAATTGGAATTCACACCCTATATTAAAATCTCCTCCAATCTTCACCTCTGAGACATGGCTGTCTCAAGACTGTTTTGTTTCCCTTCCTGGTGGAATTTTGCACTTTTATGTCCTGTGTAGCAGCAGGTAGTGTGGCTTTGAGAAAATAAAATGGCCACCTTGCTCCGCTGTTCTTTCTTTGTAAAAAAAAAAAAAAAAAAAAAAAAACGGCATAGCAATCTTGGCCTTTCTAGCTGTGTGACCCCAGGCCGGTCAATCCCTCCTCCTCTCCAAGCCTCGGATTCCTCCCCTGAGAAGTAAAGAAAATAACTCCTAAACTGCCTCCCGAGGCTTGCTGGCAGGATCCAAGGTGTCCAGAGATGTT