Transcript: lnc-MAP3K14-3:6

Basic information

LNCipedia transcript ID: lnc-MAP3K14-3:6 
LNCipedia gene ID: lnc-MAP3K14-3
Location (hg38): chr17:45253784-45273570
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1714 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002imm_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.8646 non-coding 
CPAT coding probability 65.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MAP3K14-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf46-3:6
4.0 lnc-MAP3K14-3:6
4.1 lnc-MAP3K14-3:6
5.0 lnc-MAP3K14-3:6
5.1 lnc-GFAP-22:11
5.2 lnc-MAP3K14-3:6