Transcript: lnc-MAP3K2-2:1

Basic information

LNCipedia transcript ID: lnc-MAP3K2-2:1 
LNCipedia gene ID: lnc-MAP3K2-2
Location (hg38): chr2:127436240-127470488
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 445 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004437; NONHSAT074159
Alternative gene names: XLOC_002310; linc-MAP3K2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.0807 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAP3K2-2:1
3.1 lnc-MAP3K2-2:1
4.0 lnc-MAP3K2-2:1
4.1 lnc-MAP3K2-2:1
5.0 lnc-MAP3K2-2:1
5.1 lnc-CCDC115-18:1
5.2 lnc-MAP3K2-2:1