Transcript: lnc-MAP3K7CL-5:1

Basic information

LNCipedia transcript ID: lnc-MAP3K7CL-5:1 
LNCipedia gene ID: lnc-MAP3K7CL-5
Ensembl Gene ID: ENSG00000273017
Ensembl Transcript ID: ENST00000609910
Location (hg38): chr21:29359002-29359453
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 452 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609910.1
Alternative gene names: ENSG00000273017.1; AP000240.9; AP000240.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.324 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K7CL-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf7-5:1
4.0 lnc-C21orf7-5:1
4.1 lnc-C21orf7-5:1
5.0 lnc-C21orf7-5:1
5.1 lnc-OLIG1-37:1
5.2 lnc-MAP3K7CL-5:1