Transcript: lnc-MAP3K8-18:1

Basic information

LNCipedia transcript ID: lnc-MAP3K8-18:1 
LNCipedia gene ID: lnc-MAP3K8-18
Location (hg38): chr10:29987469-29991697
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 463 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_282_chr10:30276397-30280626_adipose
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -117.227 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K8-18:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP3K8-18:1
4.0 lnc-MAP3K8-18:1
4.1 lnc-MAP3K8-18:1
5.0 lnc-MAP3K8-18:1
5.1 lnc-NPY4R2-212:1
5.2 lnc-MAP3K8-18:1