Transcript: lnc-MAP3K8-195:1

Basic information

LNCipedia transcript ID: lnc-MAP3K8-195:1 
LNCipedia gene ID: lnc-MAP3K8-195
RefSeq ID: NR_134497
Location (hg38): chr10:30723219-30723740
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 440 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134497.1
Alternative gene names: LOC105376480


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -288.7608 non-coding 
CPAT coding probability 2.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K8-195:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-NPY4R2-195:1
5.1 lnc-NPY4R2-195:1
5.2 lnc-MAP3K8-195:1