Transcript: lnc-MAP3K9-3:11

Basic information

LNCipedia transcript ID: lnc-MAP3K9-3:11 
LNCipedia gene ID: lnc-MAP3K9-3
Location (hg38): chr14:71292755-71310611
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 396 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022779; NONHSAT037615
Alternative gene names: XLOC_011064; linc-MAP3K9-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -502.4501 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K9-3:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAP3K9-2:9
3.1 lnc-MAP3K9-3:11
4.0 lnc-MAP3K9-3:11
4.1 lnc-MAP3K9-3:11
5.0 lnc-MAP3K9-3:11
5.1 lnc-ABCD4-42:28
5.2 lnc-MAP3K9-3:11