Transcript: lnc-MAP3K9-3:16

Basic information

LNCipedia transcript ID: lnc-MAP3K9-3:16 
LNCipedia gene ID: lnc-MAP3K9-3
Location (hg38): chr14:71310556-71321819
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 270 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA418:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -245.0525 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K9-3:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MAP3K9-3:16
4.1 lnc-MAP3K9-3:16
5.0 lnc-MAP3K9-3:16
5.1 lnc-ABCD4-42:8
5.2 lnc-MAP3K9-3:16