Transcript: lnc-MAP3K9-3:19

Basic information

LNCipedia transcript ID: lnc-MAP3K9-3:19 
LNCipedia gene ID: lnc-MAP3K9-3
Location (hg38): chr14:71292725-71321848
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 547 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259146.2|ENST00000555771.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -377.2599 non-coding 
CPAT coding probability 4.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K9-3:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAP3K9-3:19
5.0 lnc-MAP3K9-3:19
5.1 lnc-ABCD4-42:2
5.2 lnc-MAP3K9-3:19