Transcript: lnc-MAP3K9-3:21

Basic information

LNCipedia transcript ID: lnc-MAP3K9-3:21 
LNCipedia gene ID: lnc-MAP3K9-3
Location (hg38): chr14:71292729-71321848
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 773 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259146.2|ENCT00000135436.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -52.2523 non-coding 
CPAT coding probability 5.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K9-3:21 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAP3K9-3:21
5.0 lnc-MAP3K9-3:21
5.1 lnc-ABCD4-42:4
5.2 lnc-MAP3K9-3:21