Transcript: lnc-MAP3K9-3:25

Basic information

LNCipedia transcript ID: lnc-MAP3K9-3:25 
LNCipedia gene ID: lnc-MAP3K9-3
Location (hg38): chr14:71292724-71321778
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2015 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259146.2|MICT00000106812.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -127.4376 non-coding 
CPAT coding probability 3.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K9-3:25 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAP3K9-3:25
5.0 lnc-MAP3K9-3:25
5.1 lnc-ABCD4-42:14
5.2 lnc-MAP3K9-3:25