Transcript: lnc-MAP3K9-3:26

Basic information

LNCipedia transcript ID: lnc-MAP3K9-3:26 
LNCipedia gene ID: lnc-MAP3K9-3
Location (hg38): chr14:71307178-71321778
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2707 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259146.2|HBMT00000448525.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -80.5086 non-coding 
CPAT coding probability 6.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP3K9-3:26 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAP3K9-3:26
5.0 lnc-MAP3K9-3:26
5.1 lnc-ABCD4-42:15
5.2 lnc-MAP3K9-3:26