Transcript: lnc-MAP6-2:5

Basic information

LNCipedia transcript ID: lnc-MAP6-2:5 
LNCipedia gene ID: lnc-MAP6-2
Location (hg38): chr11:75758470-75759416
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 273 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT023125; FPKM1_group_4953_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.3823 non-coding 
CPAT coding probability 6.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAP6-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP6-2:5
4.0 lnc-MAP6-2:5
4.1 lnc-MAP6-2:5
5.0 lnc-MAP6-2:5
5.1 lnc-WNT11-10:5
5.2 lnc-MAP6-2:5