Transcript: lnc-MAPK6-10:5

Basic information

LNCipedia transcript ID: lnc-MAPK6-10:5 
LNCipedia gene ID: lnc-MAPK6-10
Location (hg38): chr15:52679474-52690253
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1224 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000023043.1|MICT00000116868.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -111.4676 non-coding 
CPAT coding probability 2.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAPK6-10:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAPK6-10:5
5.0 lnc-MAPK6-10:5
5.1 lnc-CCNDBP1-130:1
5.2 lnc-MAPK6-10:5