Transcript: lnc-MAPK6-3:9

Basic information

LNCipedia transcript ID: lnc-MAPK6-3:9 
LNCipedia gene ID: lnc-MAPK6-3
Location (hg38): chr15:51913154-51915722
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2073 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000503512
Alternative gene names: ENSG00000248241


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.3773 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAPK6-3:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAPK6-2:1
3.1 lnc-MAPK6-3:1
4.0 lnc-TMOD3-3:1
4.1 lnc-TMOD3-3:1
5.0 lnc-TMOD3-3:1
5.1 lnc-CCNDBP1-116:1
5.2 lnc-MAPK6-3:9