Transcript: lnc-MAPKAP1-2:2

Basic information

LNCipedia transcript ID: lnc-MAPKAP1-2:2 
LNCipedia gene ID: lnc-MAPKAP1-2
RefSeq ID: NR_121584
Location (hg38): chr9:126270124-126275915
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2096 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121584; NR_121584.1
Alternative gene names: LOC101929116


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.9825 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAPKAP1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAPKAP1-2:2
4.0 lnc-MAPKAP1-2:2
4.1 lnc-MAPKAP1-2:2
5.0 lnc-MAPKAP1-2:2
5.1 lnc-SPOUT1-88:2
5.2 lnc-MAPKAP1-2:2