Transcript: lnc-MARCH10-1:5

Basic information

LNCipedia transcript ID: lnc-MARCH10-1:5 
LNCipedia gene ID: lnc-MARCH10-1
Ensembl Gene ID: ENSG00000283538
Ensembl Transcript ID: ENST00000636248
Location (hg38): chr17:62910690-62968549
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1131 bp
Exons: 5
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636248.1
Alternative gene names: ENSG00000283538.1; RP11-180P8.1; AC005972.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.5982 non-coding 
CPAT coding probability 0.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MARCH10-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MARCH10-1:5
5.0 lnc-MARCH10-1:5
5.1 lnc-CYB561-23:4
5.2 lnc-MARCH10-1:5