Transcript: lnc-MARCH4-2:2

Basic information

LNCipedia transcript ID: lnc-MARCH4-2:2 
LNCipedia gene ID: lnc-MARCH4-2
Ensembl Gene ID: ENSG00000232485
Ensembl Transcript ID: ENST00000431856
Location (hg38): chr2:216487804-216498750
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 584 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000431856.1; AC098820.3-002; OTTHUMT00000337361.1; NONHSAT076809
Alternative gene names: ENSG00000232485.2; AC098820.3; OTTHUMG00000154850.1; AC098820.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.8092 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MARCH4-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MARCH4-2:2
4.0 lnc-MARCH4-2:2
4.1 lnc-MARCH4-2:2
5.0 lnc-MARCH4-2:2
5.1 lnc-MREG-9:9
5.2 lnc-MARCH4-2:2