Transcript: lnc-MARCKS-1:9

Basic information

LNCipedia transcript ID: lnc-MARCKS-1:9 
LNCipedia gene ID: lnc-MARCKS-1
Location (hg38): chr6:113904120-113929586
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7209 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000175967.3|ENCT00000376501.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.3933 non-coding 
CPAT coding probability 8.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MARCKS-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MARCKS-1:9
5.0 lnc-MARCKS-1:9
5.1 lnc-RFPL4B-15:6
5.2 lnc-MARCKS-1:9