Transcript: lnc-MARCKS-9:1

Basic information

LNCipedia transcript ID: lnc-MARCKS-9:1 
LNCipedia gene ID: lnc-MARCKS-9
Location (hg38): chr6:114011080-114028335
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2006 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3238_NR_027060
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.4 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MARCKS-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MARCKS-9:1
4.0 lnc-MARCKS-9:1
4.1 lnc-MARCKS-9:1
5.0 lnc-MARCKS-9:1
5.1 lnc-RFPL4B-21:1
5.2 lnc-MARCKS-9:1